Atlas Free Slice Alignment Documentation

Table of Contents (Scripts):

• Atlas Free Slice Alignment Pipeline
  • main()
• Atlas Free Slice Alignment Helper Functions
  • A2DtoA3D()
  • AX()
  • L_from_xv_a_p()
  • atlas_from_aligned_slices_and_weights()
  • detjac()
  • down2ax()
  • exp()
  • extent_from_x()
  • interp()
  • inverse_transform_image()
  • robust_loss()
  • transform_image()
  • v2DToV3D()
  • weighted_see_registration()
  • x_from_n_d()

Example Jupyter Notebook:

• Atlas Free Slice Alignment Example