Installation

Clone the repository:

git clone github.com/twardlab/emlddmm

Change to the directory emlddmm has been cloned to and install the requirements:

pip install -r requirements.txt

When running interactively in python, add the appropriate path:

import sys
sys.path.append('PATH_TO_EMLDDMM_LIBRARY')

When running from command line:

python PATH_TO_EMLDDMM_LIBRARY/transformation_graph_v01.py --in INPUT_FILENAME

For details on the command line interface, see input specification.