Installation GuideΒΆ
- In order to use the 3 registration scripts in this directory, ensure that the following modules are installed:
argparse
matplotlib
nibabel
numpy
scipy
skimage
tifffile
torch
- Additionally, the following custom Python modules must be cloned from GitHub. The locations of these repositories on your local device will be used as input arguments for all 3 scripts
emlddmm (https://github.com/twardlab/emlddmm)
donglab_workflows (https://github.com/twardlab/donglab_workflows)